BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F08LP1|AL430090
(965 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1693 1910 0.0
>3x_Contig1693
Length = 15531
Score = 1910 bits (963), Expect = 0.0
Identities = 964/965 (99%)
Strand = Plus / Plus
Query: 1 atcaagaccaaacgacactgaactgaaaagcgtcacaagggacagcaccagcttaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 atcaagaccaaacgacactgaactgaaaagcgtcacaagggacagcaccagcttaaaaac 1956
Query: 61 tctcatactctgtccacagaagacacacgtctaaacagtatagtatacagagcgttgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 tctcatactctgtccacagaagacacacgtctaaacagtatagtatacagagcgttgcaa 2016
Query: 121 tccgattcaatccctggatgtattagttctaccttagtagctcaacacagaccatcggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2017 tccgattcaatccctggatgtattagttctaccttagtagctcaacacagaccatcggat 2076
Query: 181 cgggtgttcgttttgattcaccaaaaataattatttcaaactgtgcgtaattctctcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2077 cgggtgttcgttttgattcaccaaaaataattatttcaaactgtgcgtaattctctcttt 2136
Query: 241 atggtacatgtgcgaaaaatgctgaagagaacaacagacttattgatagaaactaaaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2137 atggtacatgtgcgaaaaatgctgaagagaacaacagacttattgatagaaactaaaagg 2196
Query: 301 atagacaaacggcaggtgaaaccactcaatggtggtatcatcttcggatccagtcagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2197 atagacaaacggcaggtgaaaccactcaatggtggtatcatcttcggatccagtcagtaa 2256
Query: 361 gacaattactatttttttatttcatataagtatatatattacccgtaacgaggtgtttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 gacaattactatttttttatttcatataagtatatatattacccgtaacgaggtgtttta 2316
Query: 421 acaaaccttagaaacctaaagattttagcaagttcaacttgacctgtctttcgaattccg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2317 acaaaccttagaaacctaaagattttagcaagttcaacttgacctgtctttcgaattccg 2376
Query: 481 gtctattgtctctccatagaatgcmagcgtcgatgttagctccagactcaatgtttggtt 540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2377 gtctattgtctctccatagaatgcaagcgtcgatgttagctccagactcaatgtttggtt 2436
Query: 541 cacttaggatactcatcacactgagcaatatcatttcgacgctttgaactggtgaccatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2437 cacttaggatactcatcacactgagcaatatcatttcgacgctttgaactggtgaccatc 2496
Query: 601 tctcacactcgtgttcgtacatatttggatcagacccaggagagtgaagaatggatatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2497 tctcacactcgtgttcgtacatatttggatcagacccaggagagtgaagaatggatatac 2556
Query: 661 acacttcaccgttaggatagatattaggatgtagaatactaggttggaacgtaagttttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 acacttcaccgttaggatagatattaggatgtagaatactaggttggaacgtaagttttg 2616
Query: 721 gaggattcaatggataatctttagggaaatccaatcttgcattgaagacgccaccttcgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2617 gaggattcaatggataatctttagggaaatccaatcttgcattgaagacgccaccttcgt 2676
Query: 781 agcaggaatccggtggacccatgatcaaacaatcccactggaacaaattcgaatcatcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 agcaggaatccggtggacccatgatcaaacaatcccactggaacaaattcgaatcatcaa 2736
Query: 841 tcggactggcgagtattccctctgggctatccttagtcaatttctctagttctttcaaca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2737 tcggactggcgagtattccctctgggctatccttagtcaatttctctagttctttcaaca 2796
Query: 901 aacgtttctgtgcagtcttggacattgtatgctcaacccagttaacttgtgaacaccgta 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2797 aacgtttctgtgcagtcttggacattgtatgctcaacccagttaacttgtgaacaccgta 2856
Query: 961 ctctc 965
|||||
Sbjct: 2857 ctctc 2861
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6716
Number of Sequences: 1807
Number of extensions: 6716
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 965
length of database: 10,358,551
effective HSP length: 16
effective length of query: 949
effective length of database: 10,329,639
effective search space: 9802827411
effective search space used: 9802827411
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)